What Causes Hypothyroidism?

In an earlier post I wrote, “Hypothyroidism is so common I suspect an environmental cause.” In fact, I suspect that all common diseases are caused (= made much more likely by) differences between modern life and Stone-Age life. Since then, thanks to comments and email, I have learned more about hypothyroidism. According to Dennis Mangan, it has become a lot more common during the last 100 years, which implies an environmental cause. The most common type of hypothroidism is called Hashimoto’s thyroiditis. It is an autoimmune disorder where the immune system attacks the thyroid, damaging it. A reader with hypothyroidism wrote me:

When I was first tested for thyroid levels, part of the test (which I think is standard protocol) was to test the level of antibodies to thyroid. My levels were off the charts.

This supports what I said. I’m sure that autoimmune diseases are caused by one particular difference from Stone Age life: lack of bacteria in our food. The immune stimulation the harmless bacteria provided can be provided in other ways — bee stings, for example. But I don’t think Stone-Age people got a lot more bee stings than we do.

Advances in Cooking: Chocolate Chip Cookies

Toni Rivard, a Dallas dessert caterer, makes one of the best chocolate-chip cookies in America, according to Forbes Traveller. She ages her cookie dough about three days. She says it improves the texture. I wonder if it improves the flavor, too:

Rivard’s secret? “I like to age my cookie dough and feel that it makes for a better texture in cookies. As a result, the aptly-named OMG! [which is what customers have actually said when they taste one] chocolate chip cookies at Creme de la Cookie are soft and chewy with a deep rich flavor.

Fermenting cookie dough should certainly improve the flavor, although chocolate already supplies a lot of complexity. My experience has been that cooking delicious stuff became a lot easier when I started using fermentation to help (e.g., miso soup instead of soups flavored without fermented ingredients).

Thanks to David Archer.

This Blog Reduces Sinus Congestion (continued)

Tim Beneke writes:

After 21 days of eating a lot of yogurt [more than 16 ounces/day] and then 15 days of acidophilus pearls — 2 a day for the first 5 days and then 1 a day since, it’s very clear that I can breathe substantially better through my nose. This has been obvious for at least a couple of weeks — it still seems to be improving gradually. I feel it clearly when I breathe. And, rather dramatically, my sense of smell has returned. I got a severe sinus infection in 1972; since then, my nose has been fairly stuffed and my sense of smell weak. Now I’m living in a different olfactory universe.

For a few years, I’ve cleaned up 4 or 5 times a week after a bunch of feral cats that I feed. Until the last 3 weeks or so, I only used my eyes to spot the cat poop. Now I use my sense of smell a lot and often smell it before I see it. Another unpleasant example — I don’t flush my toilet after peeing to conserve water; by the end of the day it looks pretty funky, but I could barely smell its funkiness in the past. Now I smell it quite vividly and am more prone to flush it.

Earlier post on the subject.

Why Do Cats Lick Themselves?

The usual answer, of course, is: To clean themselves. There are other answers:

Some people think it is used as a way to control their temperature – it keeps their fur smooth, which in the winter traps heat. In the summer, it spreads saliva on the fur and cools them down and can also loosen fur so that they shed more easily. Others think it is a natural way of reducing parasites like fleas or ticks.

Perhaps cats lick themselves to ingest more foreign bacteria and dirt, which they need to be healthy. Test of this proposal: Feed a cat more fermented food, it should lick itself less. (Just as I became less of a foodie when I ate more fermented food.)

The value of evolutionary explanations.

Infectious Disease Specialist Ignores the Immune System

A new book called Rising Plague by Brad Spellberg, a UCLA professor of medicine specializing in infectious disease, at County Harbor-UCLA Medical Center, is about the increase in drug-resistant bacteria. From an article about the not-yet-published book:

In the United States, more than 300,000 people die each year from infectious diseases such as influenza and pneumonia, often caused by drug-resistant bacteria.

“The scary thing is that many of these were healthy, young individuals,” said Robert Guidos, vice president of public policy and government relations for the Infectious Disease Society of America. “There are very few drugs, if any, to treat these bacteria, and there are almost none in the pipeline.”

I believe it is very likely that these “healthy” young people weren’t eating enough fermented food and thus had poorly-functioning immune systems. The article continues:

[Spellberg], however, argues in his book that drug companies are not solely responsible. Blame for the decline in antibiotics should also not be aimed at physicians for over-prescribing these drugs, nor hospitals for lacking sufficient standards in cleanliness or drug distribution.

“This problem is complex enough that it is not accurate and not helpful to blame any one group,” Spellberg said. “What we need to do is focus on solutions.”

Public awareness will go far in spurring change, he argues. Ultimately, legislators, drug companies, hospitals and doctors will have to devise a way to spur more production of new antibiotics, which become obsolete as bacteria change to survive.

Will have to“. As if there is no other alternative. The possibility of strengthening the immune system is not considered. Just as UC Berkeley epidemiology professors (along with the rest of their profession) ignore the immune system, here is a doctor ignoring it. Here is a longer statement by Spellberg that ignores the immune system. He’s a specialist in infectious disease. He’s repeating the conventional wisdom of his profession. UCLA is a top-ranked medical school. This is mental blindness on a massive scale with awful consequences.

Beijing Air: Not Dirty Enough

I’ve been back in Beijing a week. I’ve been eating lots of fermented food, which is easy to get, including fermented eggs (10 for $1.50) sold at a stand in a shopping mall. There is a bigger yogurt selection here than in Berkeley. Tsinghua University sells its own perfectly good yogurt (20 cents a serving). Every supermarket has a big pickle selection.

In Berkeley, as I blogged earlier, a few months ago I noticed that my nose was no longer runny. My Kleenex consumption, which had been about one box of Kleenex every month or so, was reduced to almost zero. (A reader of this blog had a similar experience.) No doubt this was due to eating much more fermented food. The runny-nose-absence has continued in Beijing.

Last year in Beijing, I had a runny nose. I used about one tissue packet per day. I ate almost no fermented food. So far so good. The interesting twist is that dirty city air has been linked to less runny nose. Air pollution, in other words, can have the same effect as fermented food. Last year, apparently, Beijing air wasn’t dirty enough to get rid of my runny nose.

I’m not joking. After I realized this, I felt a lot better about Beijing’s air, which I have long said is the worst thing about living here. Someday I will blog about the health benefits of smoking, which suggest the same conclusion.

Hormesis Revisited

There are several ways to realize the vast implausibility of — and thus the vast amount of information conveyed by — radiation hormesis. If you are not an experimental scientist, you may not realize how incredibly hard it is to find a treatment that substantially improves something complex. Think how hard it would be to make your laptop work a lot better. Not by redesigning and building a different laptop — but by doing something to the carefully-designed laptop you have now. Has such a thing ever happened in the whole history of engineering? Probably not. Or consider the possibility that shooting a bullet at your laptop (or any other complex machine) will make it work a lot better. Absurd. Couldn’t possibly happen.

Yet that is exactly what happens in radiation hormesis: Small amounts of radiation improve health. This review article gives a wide range of examples. Experimental:

Bhattarcharjee in 1996 showed that when the mice preirradiated with just adapting doses of 1 cGy/day for 5 days (without a challenge dose), thymic lymphoma was induced in 16% of the animals (Bhattarcharjee 1996). Interestingly, when preirradiated mice were exposed to a 2 Gy challenge dose, thymic lymphoma was induced again in 16% of the animals. However, the challenge dose alone, induced thymic lymphoma in 46% of the mice.

Epidemiological:

Cancer frequency among [United Kingdom] nuclear power plant workers was lower than the national average (Kendal et al. 1992).

(I’ve never heard anyone complain there wasn’t enough radioactive radon in their basement, but in some cases that’s true.) Thomas Luckey, the discoverer of the effect, wrote a book about it, reflecting the vast number of examples.

What does it mean? Obviously it supports my umami hypothesis. Life evolved in a world of junk and damage; that junk and damage was used to make things work better. Think of a police force. They function best spread over a city, travelling here and there. When there’s a crime, someone will already be close and get there quickly; many crimes will be stopped in progress. A low crime rate is better than a very low crime rate because it gets the police out of the police station and allows them to practice their skills. With too little crime, the police spend most of their time in the police station. When a crime occurs it takes longer to reach the scene (so small problems become big ones) but also, having nothing else to do, they overreact: treat small problems as big ones. That our body’s defense mechanisms are slow to react means infections and cancers become bigger than necessary (and sometimes lethal); that they overreact means we get autoimmune diseases.

Earlier post about hormesis.

“Kombucha Reconsidered”

At Cancer Decisions RWM has written two posts called “Kombucha Reconsidered”. After drinking kombucha for a while, he decided to stop. One reason was lack of evidence of benefit:

When I began investigated the actual medicinal properties of Kombucha tea, I thought I would be overwhelmed with information. Not so. For something that has been around for so long, there are only 38 scientific articles in PubMed on the topic of kombucha. Most of these are technical studies on the nature of the bacteria and yeast in the brew. Only a few of these are clinical.

In particular, no evidence of benefit for cancer:

But I am unaware of any credible data linking kombucha consumption to the prevention of either recurrences or metastases. (PubMed yields just two articles on the topic of kombucha and cancer, both of them negative.) This is a poor basis on which to make health decisions.

He also found two case reports, one from 1995, the other from 2009, where kombucha might have caused illness. In the 1995 the evidence is weak; in the 2009 report the connection is more plausible — but the sick person had HIV. The authors nevertheless generalize to everyone: “Consumption of this tea should be discouraged.”

This is a reason self-experimentation is important: So you can ignore inane statements in research articles. After I found that flaxseed oil improved my balance, I could ignore research that supposedly showed poor conversion of short-change omega-3 (in flaxseed oil) to long-chain omega-3 (used by the brain). Had RWM managed to measure the effect of kombucha on himself, he would have a vastly better basis for deciding whether or not it helped him.

This is also a reason that theory is important. John Tukey, the statistician, spoke of “gathering strength” when analyzing data. It is rare that a single body of data tells you how to analyze it, he said. (For example, what transformation to use.) You should use similar data sets to help decide. Scientific theory has the same effect. Before I started drinking kombucha, I didn’t have obvious digestive problems (unlike a friend) and my immune system seemed to work well. So it wasn’t easy to measure its effect. Yet I drink it and am untroubled by the evidence that worries RVM because I have a theory: the umami hypothesis (that we need a steady intake of bacteria to be healthy). This allows me to assess the effect of kombucha — whether it is likely to be good or bad — with the help of evidence from other bacteria-rich food (yogurt, natto, etc.) and much different data (the effect of bee stings on arthritis, hormesis, epidemiology, the effects of turmeric, etc.). Because the umami hypothesis appears to be true, apparently bacteria intake is beneficial — and kombucha has lots of bacteria.

Thanks to Tom George.

The Appendix and the Umami Hypothesis

Your appendix — a kind of cul-de-sac off your large intestine — can be dangerous. A British man was recently rushed to the hospital with a burst appendix three weeks after he’d had an operation to remove it. Surgeons have routinely removed it — seemingly without problems. Is the appendix an evolutionary vestige, as Darwin believed, or does it do something beneficial?

In the last few years, two articles — one in Journal of Theoretical Biology, the other in Journal of Evolutionary Biology — by William Parker, a professor of surgery at Duke, and others have argued that the function of the appendix is to harbor bacteria. If diarrhea washes out your intestines, bacteria safely hiddne in the appendix can repopulate them. (A theory supported by the position of the appendix — roughly in the middle of your intestines.) That makes perfect sense.

The connection with my umami hypothesis is that both assume that the foreign bacteria within us are precious and endangered. (My umami hypothesis says we need to consume plenty of bacteria to be healthy and that our food preferences help us do so.) The precious part is widely accepted; it’s the endangered part that’s new. If we need bacteria so much, why should they be endangered? We need our eyes; they aren’t endangered. My answer is that to protect bacteria carries a cost: The most hospitable the digestive system becomes to bacteria, the less effective it will become at everything else, including digestion. And bacteria were/are cheap. Rather than protect them, the system has been shaped to require them. Just as gas-guzzling cars evolved when gas was cheap. Making cars more gas-efficient will make them less efficient at other functions, such as signaling status.

Thanks to Kathy Tucker, James Andrewartha, and James Lucoff.

Dietary Self-Selection by Young Children

In the 1920s and 30s, a Chicago pediatrician named Clara Davis did a remarkable experiment/demonstration: Letting young children choose their own food. About eleven children chose from a list of 30 little-processed foods — including sour milk, the only bacteria-rich food on the list — and could eat as much of each one as they wished. The choices included peaches, beef, carrots, beets, barley, bone marrow, pineapple, cabbage, lettuce, potatoes, and sweet breads. Many of the foods were supplied both raw and cooked. The experiment lasted about 6 years.

The main result was that the children were very healthy:

There were no failures of infants to manage their own diets; all had hearty appetites; all thrived. Constipation was unknown among them and laxatives were never used or needed. Except in the presence of parenteral infection, there was no vomiting or diarrhea. Colds were usually of the mild three-day type without complications of any kind. There were a few case of tonsillitis but no serious illness among the children in the six years.

Some of them were malnourished at the start of the experiment; all recovered. One had rickets and was offered cod liver oil. He drank a little bit of it while sick but after he recovered never drank it again.

Davis’s observations support the idea that we have inborn desires that help us choose what to eat. Davis emphasized that there was great variation from one child to another in what they ate — as Weston Price noted a great variation from one healthy community to the next in what they ate. She didn’t give details, however. The notion that our desires, given Stone-Age surroundings, help us choose a healthy diet is what led me to the umami hypothesis. It started with the idea that in the Stone Age our liking for complex, sour, and umami flavors caused us to eat food with more bacteria than fresh food. High-bacteria food tasted better than low-bacteria food; it was more sour, more umami, and had a more complex flavor. Suggesting that we need to eat bacteria to be healthy.